Biomathematics: Modelling and Simulation by J. C. Misra

By J. C. Misra

Offers details on modelling and simulation in biomathematics. This e-book is of curiosity to researchers who're drawn to some of the components of the sector, and to graduate scholars in comparable components, in addition to academics. the various chapters were written via exotic specialists within the box.

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Sample text

Evidence for gene conversion between a pair of maize actin genes (involving Maz56 and Maz63; see below) has been reported in [19]. In the present study, the following four maize sequences were analyzed: Maz56 (GenBank/EMBL accession number U60514), Maz63 (U60513), Maz89 (U60508), and Maz95 (U60507). As discussed in Sec. 2, prior to any phylogenetic analysis the DNA sequences need to be aligned. This was done with the program Clustal-W [28], using the default parameter settings and discarding columns with gaps.

Kishino and T. Yano, Dating the human-ape splitting by a molecular clock of mitochondrial DNA, J. Molecular Evolution 22 (1985) 160-174. [12] D. Heckerman, A tutorial on learning with Bayesian networks, in Learning in Graphical Models, ed. M. I. Jordan, Adaptive Computation and Machine Learning (MIT Press, Cambridge, Massachusetts, 1999), pp. 301-354. Detecting Mosaic Structures in DNA Sequence Alignments 35 J. Hein, A heuristic method to reconstruct the history of sequences subject to recombination, J.

1 1000 250 500 750 1000 250 500 750 tWrr^vwVfXP^^^ 250 500 750 r 1000 Fig. 21. D e t e c t i o n of g e n e conversion b e t w e e n t w o maize a c t i n g e n e s . The figure contains two subfigures, where each subfigure is composed of three graphs, as explained in the caption of Figure 20. Left: Heuristic training scheme. Right: Parameter estimation with maximum likelihood. Detecting Mosaic Structures in DNA Sequence Alignments 1 200 400 600 800 1 200 400 1 200 400 600 800 1 200 400 1 200 400 600 800 1 200 400 a 600 fl 600 600 31 800 ; 800 800 Fig.

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